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- AP manufactured solar cells
- Abiotic peptide synthesis
- Active color gemstone display
- Adhesive interfaces
- Algorithmic selfassembly
- Alternatives to the term "Nanofactory"
- Analogies and their dangers
- Anatase
- Architectural engineering
- Argon
- Arrow of time
- Artificial life
- Assembly level 1 (gem-gum factory)
- Assembly level 2 (gem-gum factory)
- Assembly level 4 (gem-gum factory)
- Assembly line orienting stage
- Assembly line positioning stage
- Assembly lines in gem-gum factories
- Assembly subsystem of a gem-gum factory
- Atmosphere sentinels
- Atomic precision
- Atomically precise bearings
- Atomically precise manufacturing
- Atomically precise nanostructure
- Atomically precise roller gearbearing
- Attachment chains
- Base material
- Batch transport for reduction of friction losses
- Beryl
- Beta carbon nitride
- Binary gem-like compound
- Biointerfacing gem-gum based technologies
- Biomineralization
- Biominerals
- Block diagram of a gem-gum on-chip factory
- Bootstrapping atomic precision
- Bootstrapping methods for productive nanosystems
- Boron nitrogen dative bond interfaces
- Bottom-up Top-down overlap
- Bottom-up manufacturing
- Bottom scale assembly lines in gem-gum factories
- Bottom up positional assembly
- Brachiating gridcrawlers
- Branching factor
- Bromellite
- Brookite
- Brownian motion
- Building chamber
- Bunching
- Carbon dioxide
- Castle in the sky
- Cellular shape shifting tangible systems
- Center for Bits and Atoms
- Ceres
- Ceria
- Chamber to part size ratio
- Characteristic bending length
- Charts for gemstone-like compounds
- Cheat sheet
- Citizen science
- Claytronics
- Cleanroom lockout
- Common stones
- Computronium
- Connection mechanism
- Conservative estimation
- Continuity of perception
- Convergent assembly to hierarchical assembly correspondences
- Coordinate bond
- Copyfication square
- Coumputation subsystem
- Coupling mechanism
- Covalent bond
- Covalent bonds
- Cryovolcanism
- Crystolecular element
- Crystolecular unit
- Crystolecule fragment
- Data taken hostage
- Deliberate slowdown at the lower assembly levels
- Dialondeite
- Diamondoid crystolecular machine element
- Diamondoid heat pipe system
- Diffusion
- Digital manufacturing
- Direct physical hacking attacks
- Drexler-Smalley debate on molecular nanotechnology
- Drive subsystem of a gem-gum factory
- Dystactic phase
- Early diamondoid nanosystem pixel (direct path)
- Effective concentration
- Electrically conductive gem-like compounds