Noncyclic termination control - Revision history

Apm: Apm moved page Termination control to Noncyclic termination control: more specific

2026-06-25T09:52:57Z

Apm moved page Termination control to Noncyclic termination control: more specific

← Older revision	Revision as of 11:52, 25 June 2026
(No difference)

Apm: added wikitodo

2026-06-22T07:21:11Z

added wikitodo

← Older revision		Revision as of 09:21, 22 June 2026
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	{{site specific term}}		{{site specific term}}
			{{wikitodo\|Add illustrative images of ton edges of 3D DNA origami. And of capsid structures example for the deceptive case of these.}}

	'''Examples of termination control:''' <br>		'''Examples of termination control:''' <br>
	– rotationally symmetric assembly with specifiable number of segments left out <br>		– rotationally symmetric assembly with specifiable number of segments left out <br>

Apm: /* De-novo proteins */

2026-04-30T06:37:59Z

De-novo proteins

← Older revision		Revision as of 08:37, 30 April 2026
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	* Internal cohesion, external intefaces and eventual other external functionality are <br>three mutually competing factors on the choice of side-chain sequences. <br>Such a situation is not present in [[structural DNA nanotechnology]].		* Internal cohesion, external intefaces and eventual other external functionality are <br>three mutually competing factors on the choice of side-chain sequences. <br>Such a situation is not present in [[structural DNA nanotechnology]].
	'''Countermeasures:'''		'''Countermeasures:'''
	* [[~~Squigglesembly~~]]		* [[squigglesembly]]
	* [[~~Circumsembly~~]]		* [[circumsembly]]
	* Integrate them into more termination-control-scalable background framework <br>like e.g. [[structural DNA nanotechnology]]		* Integrate them into more termination-control-scalable background framework <br>like e.g. [[structural DNA nanotechnology]]
			* possibly [[tether assisted selfassembly]]

	== [[SDN\|Structural DNA nanotechnology]] ==		== [[SDN\|Structural DNA nanotechnology]] ==

Apm: /* Limiting factors in termination control and countermeasures */ added "Key challenges:"

2026-04-30T06:04:19Z

Limiting factors in termination control and countermeasures: added "Key challenges:"

← Older revision		Revision as of 08:04, 30 April 2026
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	= Limiting factors in termination control and countermeasures =		= Limiting factors in termination control and countermeasures =

			Key challenges:
			* getting a sufficient size of [[orthogonal sets of selfassembling building blocks]]
			* the issue of [[accidental erroneous binding in selfassembly]], <br>i.e. when interfaces not supposed to binding to each other need to come apart again (or constitute a tolerable error).

	== De-novo proteins ==		== De-novo proteins ==

Apm: /* Structural DNA nanotechnology */

2026-04-30T05:54:00Z

Structural DNA nanotechnology

← Older revision		Revision as of 07:54, 30 April 2026
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	* Integrate them into more termination-control-scalable background framework <br>like e.g. [[structural DNA nanotechnology]]		* Integrate them into more termination-control-scalable background framework <br>like e.g. [[structural DNA nanotechnology]]

	== Structural DNA nanotechnology ==		== [[SDN\|Structural DNA nanotechnology]] ==

	* Diffusuion time.<br> Especially for larger 3D structures exclusively made from short strands (oglionucleotide staple strands) the achievable yields drop down far.		* Diffusuion time.<br> Especially for larger 3D structures exclusively made from short strands (oglionucleotide staple strands) the achievable yields drop down far.

Apm: /* Quasiperiodicity */

2026-04-30T05:53:36Z

Quasiperiodicity

← Older revision		Revision as of 07:53, 30 April 2026
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	What one wants is a quasiperiodic lattice that is surface terminatable at any programmable spot. <br>		What one wants is a quasiperiodic lattice that is surface terminatable at any programmable spot. <br>
	Very much like 3D structural DNA nanotechnology. <br>		Very much like [[SDN\|3D structural DNA nanotechnology]]. <br>
	The voxels encode different binding sites (intensionally) <br>		The voxels encode different binding sites (intensionally) <br>
	but have essentially the same shape (extensionally). <br>		but have essentially the same shape (extensionally). <br>

Apm: added section = Quasiperiodicity =

2026-04-30T05:53:09Z

added section = Quasiperiodicity =

← Older revision		Revision as of 07:53, 30 April 2026
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	* Integrate into more termination-control-scalable background framework like e.g. as artificial side-chains in [[de-novo proteins]].		* Integrate into more termination-control-scalable background framework like e.g. as artificial side-chains in [[de-novo proteins]].

	== Related ==		= Quasiperiodicity =

			Not referring to quasicrystals and the like. <br>

			What one wants is a quasiperiodic lattice that is surface terminatable at any programmable spot. <br>
			Very much like 3D structural DNA nanotechnology. <br>
			The voxels encode different binding sites (intensionally) <br>
			but have essentially the same shape (extensionally). <br>
			Thus "quasiperiodic".

			= Related =

	* '''[[Incremental path]]'''		* '''[[Incremental path]]'''

Apm: /* Related */

2026-03-29T16:08:27Z

← Older revision		Revision as of 18:08, 29 March 2026
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	{{todo\|look into formally quantifying the quantity of termination control}}		{{todo\|look into formally quantifying the quantity of termination control}}

			[[category:Incremental path]]

Apm: /* Related / added link to Hierarchical selfassembly

2024-07-11T13:32:16Z

Related: added link to * Hierarchical selfassembly

← Older revision		Revision as of 15:32, 11 July 2024
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	* [[Algorithmic selfassembly]]		* [[Algorithmic selfassembly]]
	* [[Fully addressable lattice selfassembly]]		* [[Fully addressable lattice selfassembly]]
			* [[Hierarchical selfassembly]]

	{{todo\|look into formally quantifying the quantity of termination control}}		{{todo\|look into formally quantifying the quantity of termination control}}

Apm: improved on the intro

2022-09-16T09:19:42Z

improved on the intro

@@ Line 2: / Line 2: @@
 '''Examples of termination control:''' <br>
 – rotationally symmetric assembly with specifiable number of segments left out <br>
-– in self-assemlbly terminating grid of voxels (carterian, hexagonal, or whatever) where <bR>subsets of those voxels (ideally each one individually) can be set or unset (addressed) individually.<br>
+– in self-assemlbly terminating A grid of voxels (carterian, hexagonal, or whatever) that when self-assembled deterministically terminates this self assembly at some point.
 Using the terminology of "addressing voxels" may be confusing:<br>
 There are no changes after assembly. Static structural structures are assumed here.<br>
 '''Delineation from superficially impressive firatures like size and symmetry:'''<br>